Not every program can. Look at three things before you choose.
It does not depend on the name of the software, but on what it can do. A margin invoice may not show VAT, and the VAT on your margin is not calculated from the invoice itself: you keep it separately. Accounting software that handles the margin scheme must therefore be able to issue an invoice without VAT, send that invoice via Peppol, and calculate your margin per piece or per period outside the invoice.
For Peppol, the Belgian government recommends category E, with as reason: "Supply subject to the special scheme for taxing the profit margin. VAT not deductible." (in Dutch on a Belgian invoice) If your software cannot pass that text along, your invoice goes out with the wrong wording.
Ask the supplier before you subscribe — some programs state themselves that they do not support the margin scheme. And ask how it fills in the return: for a piece bought for 200 euros and sold for 300 euros, 200 euros go in box 00, 82.64 euros in box 03 and 17.36 euros of VAT in box 54.
Source: Belgian FPS BOSA, note 'Bijzondere btw-regimes en Tax Category Codes in België' (efactuur.belgium.be, 25 February 2026), point 1, with the worked example and boxes 00, 03 and 54 · article 58, § 4 of the Belgian VAT Code. Read on 7 October 2026.
This is an explanation, not tax or legal advice. Put your own situation to your accountant.
A purchase register listing every item you want to sell under the margin scheme, a sales register for what goes out, and a comparison register tying purchase and sale together. Together they make the profit margin ascertainable — which is exactly the amount you pay VAT on. No registers, no margin scheme.
Only for sales to another Belgian VAT-registered business. Since 1 January 2026 those invoices must leave in a structured electronic form, through the Peppol network. Invoices to private individuals are not covered. There is no turnover threshold: the small-business exemption of 25,000 euros is covered too, because exempt is not the same as not VAT-registered.
Vintro Pro keeps, per piece, what you paid, when, and where it came from. Your stock list and your margin VAT build themselves while you work.
Free up to 10 pieces, no card number and no end date.